STRINGSTRING
PG_1219 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1219" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1219Hypothetical protein (103 aa)    
Predicted Functional Partners:
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate (377 aa)
              0.859
PG_1221
Short chain dehydrogenase/reductase oxidoreductase (241 aa)
              0.845
PG_0140
Hypothetical protein (235 aa)
   
          0.680
PG_1217
Hypothetical protein (110 aa)
 
          0.677
PG_0980
Hypothetical protein (745 aa)
   
          0.621
PG_0649
Hypothetical protein (194 aa)
   
          0.560
PG_2214
Hypothetical protein (424 aa)
   
          0.549
PG_2044
Hypothetical protein (251 aa)
   
          0.545
PG_1083
Hypothetical protein (313 aa)
   
          0.530
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1269 aa)
 
          0.508
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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