STRINGSTRING
PG_1240 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1240" - TetR family transcriptional regulator in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1240TetR family transcriptional regulator (202 aa)    
Predicted Functional Partners:
fabG
3-oxoacyl-ACP reductase (248 aa)
         
  0.785
PG_1281
Hypothetical protein (387 aa)
   
          0.768
PG_1352
Hypothetical protein (137 aa)
   
          0.693
PG_2030
Hypothetical protein (193 aa)
   
          0.651
PG_0450
Hypothetical protein (236 aa)
   
          0.630
PG_1341
Hypothetical protein (184 aa)
   
          0.564
PG_1214
Hypothetical protein (412 aa)
   
          0.537
PG_0535
Hypothetical protein (206 aa)
   
          0.506
PG_1903
Hypothetical protein (663 aa)
   
          0.481
PG_0414
Hypothetical protein (626 aa)
   
          0.477
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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