STRINGSTRING
PG_1303 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1303" - Helicase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1303Helicase (471 aa)    
Predicted Functional Partners:
PG_2072
UvrD/REP helicase (1102 aa)
 
  0.981
PG_1302
Hypothetical protein (232 aa)
              0.781
PG_1300
Hypothetical protein (179 aa)
              0.705
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (377 aa)
   
 
  0.639
PG_2094
Hypothetical protein (1515 aa)
   
          0.622
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (245 aa)
   
          0.618
PG_1301
Hypothetical protein (271 aa)
              0.611
batE
batE protein (302 aa)
   
          0.604
polA
DNA polymerase type I (926 aa)
   
 
  0.595
PG_0517
Hypothetical protein (960 aa)
   
          0.576
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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