STRINGSTRING
PG_1306 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1306" - Metallo-beta-lactamase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1306Metallo-beta-lactamase (214 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (955 aa)
              0.926
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA (221 aa)
              0.911
PG_0174
Pyridine nucleotide-disulfide oxidoreductase (938 aa)
   
 
  0.884
PG_0745
Lactoylglutathione lyase (132 aa)
   
 
  0.838
PG_1613
Glyoxalase (134 aa)
   
 
  0.835
PG_2171
D-isomer specific 2-hydroxyacid dehydrogenase (319 aa)
   
 
    0.814
hprA
Glycerate dehydrogenase (317 aa)
   
 
    0.814
PG_1308
Hypothetical protein (281 aa)
              0.756
rpoD
RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (287 aa)
   
      0.653
secDF
Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (981 aa)
 
          0.624
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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