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slyD protein (Porphyromonas gingivalis W83) - STRING interaction network
"slyD" - Peptidyl-prolyl cis-trans isomerase SlyD in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyDPeptidyl-prolyl cis-trans isomerase SlyD (190 aa)    
Predicted Functional Partners:
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (368 aa)
   
   
  0.793
PG_1317
Hypothetical protein (136 aa)
              0.689
PG_1316
Hypothetical protein (176 aa)
              0.689
PG_1318
ECF subfamily RNA polymerase sigma factor (188 aa)
              0.578
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (1137 aa)
   
 
  0.572
PG_2054
Lipoprotein PG3 (223 aa)
 
        0.571
PG_0948
AMP nucleosidase (258 aa)
 
        0.541
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (289 aa)
 
        0.533
PG_1058
OmpA family protein (672 aa)
 
        0.526
PG_1084
Thioredoxin family protein (358 aa)
 
 
  0.508
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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