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ptpA protein (Porphyromonas gingivalis W83) - STRING interaction network
"ptpA" - Dipeptidyl aminopeptidase IV in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpADipeptidyl aminopeptidase IV; Serine proteinase. Releases tripeptides from the free amino terminus of proteins. Has a requirement for Pro in the P1 position, but is inactivated by Pro in the P1’ position (732 aa)    
Predicted Functional Partners:
purD
Phosphoribosylamine--glycine ligase (431 aa)
   
        0.890
PG_1359
Hypothetical protein (323 aa)
              0.859
PG_1362
Hypothetical protein (484 aa)
              0.833
dpp11
Hypothetical protein (720 aa)
   
     
  0.789
PG_0491
Hypothetical protein (712 aa)
   
     
  0.782
PG_2082
POT family protein (513 aa)
 
        0.600
PG_0607
Hypothetical protein (120 aa)
           
  0.529
PG_0126
Type I phosphodiesterase/nucleotide pyrophosphatase (411 aa)
   
        0.524
mmdC
methylmalonyl-CoA decarboxylase subunit gamma (144 aa)
     
   
  0.499
pepO
Endopeptidase PepO (689 aa)
 
        0.476
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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