STRINGSTRING
PG_1381 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1381" - ABC transporter permease in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1381ABC transporter permease (249 aa)    
Predicted Functional Partners:
PG_1380
ABC transporter ATP-binding protein (232 aa)
 
 
  0.994
PG_1379
ABC transporter periplasmic substrate-binding protein (312 aa)
 
 
  0.990
PG_1382
Hypothetical protein (379 aa)
              0.859
ligA
NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (669 aa)
     
      0.588
PG_2109
Thiamine-phosphate pyrophosphorylase (647 aa)
              0.576
mutY
A/G-specific adenine glycosylase (407 aa)
              0.530
PG_1383
Amino acid exporter (212 aa)
              0.496
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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