STRINGSTRING
PG_1385 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1385" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1385Hypothetical protein (400 aa)    
Predicted Functional Partners:
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (859 aa)
         
  0.830
PG_0449
Hypothetical protein (460 aa)
   
     
  0.775
PG_0553
Extracellular protease (940 aa)
   
     
  0.771
PG_1341
Hypothetical protein (184 aa)
   
          0.763
PG_1835
Putative lipoprotein (455 aa)
   
          0.756
PG_1651
Hypothetical protein (995 aa)
   
     
  0.746
PG_0569
Hypothetical protein (508 aa)
   
          0.730
PG_0452
Hypothetical protein (715 aa)
   
          0.730
PG_0781
Hypothetical protein (156 aa)
   
          0.728
PG_0149
Hypothetical protein (422 aa)
   
          0.705
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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