STRINGSTRING
PG_1392 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1392" - Rod shape-determining protein RodA in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1392Rod shape-determining protein RodA (485 aa)    
Predicted Functional Partners:
PG_1393
Penicillin-binding protein 2 (621 aa)
 
  0.996
mreB
Rod shape-determining protein MreB (339 aa)
 
 
  0.986
PG_0575
Penicillin-binding protein 2 (733 aa)
 
  0.972
mraY
phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (419 aa)
 
  0.967
PG_1395
Rod shape-determining protein MreC (295 aa)
 
 
  0.963
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation (456 aa)
 
  0.938
PG_1394
Hypothetical protein (172 aa)
 
          0.934
PG_0106
Glycosyl transferase (378 aa)
 
  0.914
murE
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan (487 aa)
 
  0.894
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) (450 aa)
 
 
  0.866
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (2%) [HD]