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PG_1395 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1395" - Rod shape-determining protein MreC in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1395Rod shape-determining protein MreC (295 aa)    
Predicted Functional Partners:
mreB
Rod shape-determining protein MreB (339 aa)
 
 
  0.982
PG_1393
Penicillin-binding protein 2 (621 aa)
 
   
  0.967
PG_1392
Rod shape-determining protein RodA (485 aa)
 
 
  0.963
PG_1394
Hypothetical protein (172 aa)
 
          0.902
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (508 aa)
              0.690
PG_0575
Penicillin-binding protein 2 (733 aa)
 
   
  0.580
PG_1694
Hypothetical protein (364 aa)
 
      0.546
nadE
NAD synthetase (647 aa)
              0.521
PG_0579
Cell division protein FtsW (418 aa)
   
 
  0.516
PG_1256
Ribonuclease (504 aa)
 
        0.496
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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