STRINGSTRING
PG_1404 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1404" - Rhomboid family protein in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1404Rhomboid family protein (238 aa)    
Predicted Functional Partners:
PG_1403
Rhomboid family protein (288 aa)
 
     
  0.957
PG_1402
AP endonuclease domain-containing protein (310 aa)
         
  0.826
PG_1405
Hypothetical protein (951 aa)
              0.771
PG_1401
Tryptophanase (459 aa)
         
  0.629
fumB
Fumarate hydratase class I, anaerobic (548 aa)
   
   
  0.576
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (395 aa)
     
        0.533
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (304 aa)
   
      0.520
PG_1571
Metallo-beta-lactamase superfamily protein (471 aa)
   
        0.516
PG_1226
Cyclophilin type peptidyl-prolyl cis-trans isomerase (234 aa)
     
      0.516
yidC
Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (627 aa)
     
        0.491
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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