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dacB protein (Porphyromonas gingivalis W83) - STRING interaction network
"dacB" - D-alanyl-D-alanine carboxypeptidase in Porphyromonas gingivalis W83
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacBD-alanyl-D-alanine carboxypeptidase (510 aa)    
Predicted Functional Partners:
PG_1423
Hypothetical protein (65 aa)
              0.859
PG_1393
Penicillin-binding protein 2 (621 aa)
   
 
  0.855
PG_0575
Penicillin-binding protein 2 (733 aa)
   
 
  0.849
PG_0794
Penicillin-binding protein 1A (786 aa)
         
  0.818
mraY
phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (419 aa)
         
  0.807
PG_1097
Putative bifunctional UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase/alanine racemase (823 aa)
         
  0.800
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (379 aa)
         
  0.746
PG_0139
Lytic murein transglycosylase D (451 aa)
         
  0.739
PG_1424
Peptidylarginine deiminase; Deiminates the guanidino group of C-terminal arginine residues on a variety of peptides, including the vasoregulatory peptide-hormone bradykinin, to yield ammonia and a citrulline residue. May promote the growth of the pathogen in the periodontal pocket by producing ammonia, ammonia having a protective effect during acidic cleaning cycles in the mouth (556 aa)
              0.695
hpt
Hypoxanthine phosphoribosyltransferase (178 aa)
 
        0.527
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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