STRINGSTRING
PG_1478 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1478" - Conjugative transposon protein TraK in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1478Conjugative transposon protein TraK (207 aa)    
Predicted Functional Partners:
PG_1479
Conjugative transposon protein TraJ (368 aa)
 
     
  0.979
PG_1475
Conjugative transposon protein TraN (341 aa)
 
     
  0.975
PG_1476
Conjugative transposon protein TraM (453 aa)
 
          0.969
PG_1474
Conjugative transposon protein TraO (192 aa)
 
     
  0.951
PG_1473
Conjugative transposon protein TraQ (154 aa)
 
     
  0.948
PG_1483
Conjugative transposon protein TraE (100 aa)
 
          0.947
PG_1481
Conjugative transposon protein TraG (841 aa)
 
          0.947
PG_1482
Conjugative transposon protein TraF (111 aa)
 
     
  0.943
PG_1480
Conjugative transposon protein TraI (209 aa)
 
          0.938
PG_1477
Hypothetical protein (95 aa)
              0.867
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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