STRINGSTRING
PG_1496 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1496" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1496Hypothetical protein (91 aa)    
Predicted Functional Partners:
topB-2
DNA topoisomerase III (697 aa)
 
          0.933
PG_1494
Hypothetical protein (437 aa)
 
          0.869
PG_1500
Hypothetical protein (763 aa)
          0.846
PG_0847
Hypothetical protein (526 aa)
          0.844
PG_1458
Hypothetical protein (152 aa)
 
          0.775
PG_0816
Hypothetical protein (157 aa)
 
          0.730
PG_1474
Conjugative transposon protein TraO (192 aa)
 
          0.721
PG_1441
Lysozyme-like protein (55 aa)
   
          0.691
PG_1473
Conjugative transposon protein TraQ (154 aa)
 
          0.667
PG_0850
Excisionase DNA-binding protein (102 aa)
   
          0.608
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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