STRINGSTRING
PG_1505 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1505" - Radical SAM domain-containing protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1505Radical SAM domain-containing protein (292 aa)    
Predicted Functional Partners:
PG_1256
Ribonuclease (504 aa)
       
    0.707
PG_1504
NAD dependent protein (328 aa)
              0.663
PG_1503
LytB-like protein (316 aa)
              0.619
pnp
Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (743 aa)
     
 
    0.537
PG_1395
Rod shape-determining protein MreC (295 aa)
   
        0.450
PG_1362
Hypothetical protein (484 aa)
   
        0.434
mreB
Rod shape-determining protein MreB (339 aa)
   
        0.432
PG_1392
Rod shape-determining protein RodA (485 aa)
              0.414
PG_0579
Cell division protein FtsW (418 aa)
              0.414
rpmA
Ribosomal protein L27 (85 aa)
              0.414
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (3%) [HD]