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sodB protein (Porphyromonas gingivalis W83) - STRING interaction network
"sodB" - Superoxide dismutase, Fe-Mn in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sodBSuperoxide dismutase, Fe-Mn; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems (191 aa)    
Predicted Functional Partners:
PG_1547
Hypothetical protein (117 aa)
              0.834
PG_1546
Hypothetical protein (62 aa)
              0.834
PG_0548
Pyruvate ferredoxin/flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1193 aa)
   
   
  0.833
groS
Chaperonin, 10 kDa; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter (89 aa)
   
 
  0.832
LYS1
Saccharopine dehydrogenase (397 aa)
     
 
    0.813
polA
DNA polymerase type I (926 aa)
     
 
  0.795
PG_0618
Alkyl hydroperoxide reductase (188 aa)
   
   
  0.727
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
     
 
  0.720
PG_0429
Pyruvate synthase (619 aa)
   
   
  0.715
pgk
Phosphoglycerate kinase (418 aa)
   
   
  0.684
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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