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rfbC protein (Porphyromonas gingivalis W83) - STRING interaction network
"rfbC" - dTDP-4-dehydrorhamnose 3,5-epimerase in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase (196 aa)    
Predicted Functional Partners:
rfbD
dTDP-4-dehydrorhamnose reductase (285 aa)
 
  0.999
rfbB
dTDP-glucose 4,6-dehydratase (354 aa)
 
 
  0.999
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (289 aa)
 
   
  0.959
fcl
GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (357 aa)
   
  0.915
PG_1954
NAD dependent epimerase/reductase-like protein (339 aa)
   
  0.914
PG_1504
NAD dependent protein (328 aa)
   
  0.914
PG_1235
Epimerase/reductase (318 aa)
   
  0.914
dnaJ
dnaJ protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and Gr [...] (383 aa)
       
    0.816
PG_2159
Protoporphyrinogen oxidase (465 aa)
   
        0.814
PG_0002
Hexapeptide transferase (190 aa)
   
 
  0.775
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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