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rfbA protein (Porphyromonas gingivalis W83) - STRING interaction network
"rfbA" - Glucose-1-phosphate thymidylyltransferase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (289 aa)    
Predicted Functional Partners:
rfbB
dTDP-glucose 4,6-dehydratase (354 aa)
 
  0.999
rfbD
dTDP-4-dehydrorhamnose reductase (285 aa)
   
  0.980
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (196 aa)
 
   
  0.959
galE
UDP-glucose 4-epimerase (342 aa)
       
  0.893
PG_1277
UDP-glucose-6 dehydrogenase (421 aa)
   
 
  0.893
PG_1143
Sugar dehydrogenase (522 aa)
       
  0.892
epsD
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (402 aa)
   
 
  0.888
PG_1149
Glycosyl transferase (375 aa)
       
  0.880
PG_0129
Mannosyltransferase (374 aa)
       
  0.880
PG_1504
NAD dependent protein (328 aa)
       
  0.878
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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