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mmdC protein (Porphyromonas gingivalis W83) - STRING interaction network
"mmdC" - methylmalonyl-CoA decarboxylase subunit gamma in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmdCmethylmalonyl-CoA decarboxylase subunit gamma (144 aa)    
Predicted Functional Partners:
PG_1601
biotin--acetyl-CoA-carboxylase ligase (257 aa)
   
  0.985
fabD
Malonyl CoA-ACP transacylase (293 aa)
   
  0.969
mmdB
methylmalonyl-CoA decarboxylase subunit beta (383 aa)
 
 
  0.938
mmdA
methylmalonyl-CoA decarboxylase subunit alpha (517 aa)
 
  0.936
PG_1613
Glyoxalase (134 aa)
       
  0.932
mutB
methylmalonyl-CoA mutase; Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates (715 aa)
       
  0.917
guaB
Inosine 5-monophosphate dehydrogenase (498 aa)
   
  0.900
fabF
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (418 aa)
   
  0.891
PG_0745
Lactoylglutathione lyase (132 aa)
       
  0.867
fabK
enoyl-ACP reductase (313 aa)
       
  0.866
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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