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frdB protein (Porphyromonas gingivalis W83) - STRING interaction network
"frdB" - Fumarate reductase, iron-sulfur protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frdBFumarate reductase, iron-sulfur protein (251 aa)    
Predicted Functional Partners:
frdA
Fumarate reductase, flavoprotein subunit (647 aa)
 
  0.999
PG_1616
Hypothetical protein (230 aa)
 
   
  0.991
cydA
Cytochrome d ubiquinol oxidase subunit I (527 aa)
         
  0.982
cydB
Cytochrome d ubiquinol oxidase subunit II (387 aa)
         
  0.981
fumB
Fumarate hydratase class I, anaerobic (548 aa)
   
 
  0.976
etfA-2
Electron transfer flavoprotein subunit alpha (335 aa)
   
 
  0.902
etfA-1
Electron transfer flavoprotein subunit alpha (339 aa)
   
 
  0.892
abfT-1
4-hydroxybutyrate CoA-transferase (431 aa)
     
 
  0.857
abfT-2
4-hydroxybutyrate CoA-transferase (431 aa)
     
 
    0.838
PG_1013
acetyl-CoA hydrolase/transferase (498 aa)
     
 
    0.838
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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