STRINGSTRING
PG_1616 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1616" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1616Hypothetical protein (230 aa)    
Predicted Functional Partners:
frdA
Fumarate reductase, flavoprotein subunit (647 aa)
 
   
  0.993
frdB
Fumarate reductase, iron-sulfur protein (251 aa)
 
   
  0.991
abfT-1
4-hydroxybutyrate CoA-transferase (431 aa)
         
  0.813
sucD
Succinate-semialdehyde dehydrogenase (451 aa)
         
  0.807
etfB-2
Electron transfer flavoprotein subunit beta (261 aa)
       
    0.798
etfB-1
Electron transfer flavoprotein subunit beta (288 aa)
       
    0.798
aspA
Aspartate ammonia-lyase (475 aa)
       
    0.739
PG_1617
Hypothetical protein (152 aa)
              0.700
bioC
Biotin synthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway (255 aa)
              0.466
PG_1618
Hypothetical protein (228 aa)
              0.466
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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