STRINGSTRING
PG_1620 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1620" - Carboxyl-terminal protease-like protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1620Carboxyl-terminal protease-like protein (358 aa)    
Predicted Functional Partners:
PG_1621
Hypothetical protein (315 aa)
 
          0.971
PG_1622
DNA topoisomerase IV subunit A (898 aa)
              0.875
PG_1372
Hypothetical protein (473 aa)
   
          0.742
PG_2083
Hypothetical protein (365 aa)
   
          0.721
PG_1028
Hypothetical protein (448 aa)
   
          0.713
PG_0450
Hypothetical protein (236 aa)
   
          0.710
PG_2157
Glutamine cyclotransferase-like protein (333 aa)
   
          0.686
PG_1623
Membrane bound regulatory protein (396 aa)
              0.664
PG_2086
Hypothetical protein (139 aa)
   
          0.633
PG_1387
Hypothetical protein (308 aa)
   
          0.615
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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