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PG_1622 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1622" - DNA topoisomerase IV subunit A in Porphyromonas gingivalis W83
Nodes:
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1622DNA topoisomerase IV subunit A (898 aa)    
Predicted Functional Partners:
PG_0368
DNA topoisomerase IV subunit B (644 aa)
 
  0.997
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (654 aa)
  0.995
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (377 aa)
   
  0.942
PG_1620
Carboxyl-terminal protease-like protein (358 aa)
              0.875
PG_1621
Hypothetical protein (315 aa)
              0.871
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (506 aa)
     
   
  0.826
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (680 aa)
   
 
  0.797
polA
DNA polymerase type I (926 aa)
   
 
  0.771
nrd
Ribonucleotide reductase (850 aa)
   
   
  0.761
PG_2214
Hypothetical protein (424 aa)
   
          0.752
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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