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PG_1654 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1654" - D-alanyl-D-alanine dipeptidase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1654D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide (207 aa)    
Predicted Functional Partners:
PG_1655
Hypothetical protein (69 aa)
              0.824
PG_1653
Hypothetical protein (407 aa)
              0.625
ddl
D-alanine--D-alanine ligase; Cell wall formation (330 aa)
     
  0.620
PG_1652
Hypothetical protein (596 aa)
              0.568
PG_0011
Glycosyl hydrolase (1003 aa)
     
  0.543
PG_1651
Hypothetical protein (995 aa)
              0.513
mutA
methylmalonyl-CoA mutase small subunit; Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates (618 aa)
              0.510
PG_2171
D-isomer specific 2-hydroxyacid dehydrogenase (319 aa)
         
  0.467
hprA
Glycerate dehydrogenase (317 aa)
         
  0.467
mutB
methylmalonyl-CoA mutase; Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates (715 aa)
              0.459
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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