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PG_1687 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1687" - HIT family protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1687HIT family protein (129 aa)    
Predicted Functional Partners:
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (156 aa)
              0.867
PG_0415
PpiC-type peptidyl-prolyl cis-trans isomerase (460 aa)
   
 
  0.610
dnaK
dnaK protein; Acts as a chaperone (640 aa)
   
 
  0.548
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
   
 
  0.508
pheT
phenylalanyl-tRNA synthetase subunit beta (819 aa)
   
   
  0.486
PG_1745
Phosphoribulokinase (529 aa)
   
        0.464
fumB
Fumarate hydratase class I, anaerobic (548 aa)
              0.444
thrS
threonyl-tRNA synthetase (653 aa)
   
        0.439
PG_0783
Hydrolase (275 aa)
   
        0.434
PG_0199
TatD family protein (237 aa)
   
        0.434
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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