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greA protein (Porphyromonas gingivalis W83) - STRING interaction network
"greA" - Transcription elongation factor GreA in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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greATranscription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (156 aa)    
Predicted Functional Partners:
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1433 aa)
   
 
 
  0.869
PG_1687
HIT family protein (129 aa)
              0.867
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (330 aa)
 
 
 
  0.823
PG_1745
Phosphoribulokinase (529 aa)
   
 
  0.779
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1269 aa)
   
 
 
  0.758
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (274 aa)
     
 
  0.744
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination (444 aa)
 
 
 
  0.652
thrS
threonyl-tRNA synthetase (653 aa)
       
 
  0.630
PG_1636
FtsK/SpoIIIE family protein (861 aa)
 
        0.629
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (658 aa)
 
 
 
  0.615
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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