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udk protein (Porphyromonas gingivalis W83) - STRING interaction network
"udk" - Uridine kinase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
udkUridine kinase (209 aa)    
Predicted Functional Partners:
PG_1728
Cytidine/deoxycytidylate deaminase (150 aa)
   
    0.985
tadA
Cytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (150 aa)
   
    0.985
PG_0030
Cytidine deaminase (158 aa)
   
 
  0.984
PG_1856
Cytidine/deoxycytidylate deaminase (151 aa)
   
 
    0.981
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (216 aa)
   
  0.974
rpe
Ribulose-phosphate 3-epimerase (218 aa)
   
 
  0.884
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (239 aa)
   
 
  0.873
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (539 aa)
   
 
  0.848
cmk
Cytidylate kinase (231 aa)
     
 
  0.818
PG_1747
Ribose 5-phosphate isomerase B (145 aa)
       
    0.805
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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