STRINGSTRING
PG_1788 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1788" - Cysteine peptidase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1788Cysteine peptidase (423 aa)    
Predicted Functional Partners:
dpp11
Hypothetical protein (720 aa)
   
          0.700
PG_0491
Hypothetical protein (712 aa)
   
          0.695
PG_1236
Hypothetical protein (236 aa)
   
          0.673
PG_1787
Hypothetical protein (155 aa)
              0.628
PG_1704
Thiol-disulfide interchange protein dsbD (682 aa)
   
          0.619
PG_1218
Hypothetical protein (152 aa)
   
          0.568
PG_0724
Prolyl oligopeptidase (648 aa)
 
     
  0.566
PG_0076
N-acetylmuramoyl-L-alanine amidase (313 aa)
   
     
  0.532
PG_2030
Hypothetical protein (193 aa)
   
          0.528
PG_0832
Hypothetical protein (342 aa)
   
          0.498
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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