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PG_1827 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1827" - ECF subfamily RNA polymerase sigma factor in Porphyromonas gingivalis W83
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1827ECF subfamily RNA polymerase sigma factor (213 aa)    
Predicted Functional Partners:
PG_1660
ECF subfamily RNA polymerase sigma factor (174 aa)
   
     
  0.823
PG_1826
Hypothetical protein (139 aa)
         
  0.807
PG_1825
Hypothetical protein (53 aa)
         
  0.807
PG_0162
ECF subfamily RNA polymerase sigma factor (193 aa)
   
     
  0.716
PG_1318
ECF subfamily RNA polymerase sigma factor (188 aa)
   
     
  0.704
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1433 aa)
   
 
 
  0.647
PG_0214
ECF subfamily RNA polymerase sigma factor (166 aa)
   
     
  0.584
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
              0.494
htrA
htrA protein (498 aa)
   
   
  0.466
PG_0985
ECF subfamily RNA polymerase sigma factor (168 aa)
           
  0.449
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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