STRINGSTRING
PG_1875 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1875" - Hemolysin in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1875Hemolysin (324 aa)    
Predicted Functional Partners:
PG_1876
Hypothetical protein (275 aa)
          0.997
PG_2071
Hypothetical protein (311 aa)
 
          0.976
PG_1874
Hypothetical protein (135 aa)
         
  0.864
nhaA
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons (452 aa)
              0.738
PG_2164
FKBP-type peptidylprolyl isomerase (185 aa)
   
          0.563
cysS
cysteinyl-tRNA synthetase (490 aa)
              0.545
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (398 aa)
       
    0.517
PG_0125
Hypothetical protein (182 aa)
   
          0.514
PG_0482
Hypothetical protein (143 aa)
   
          0.496
PG_0517
Hypothetical protein (960 aa)
   
          0.491
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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