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PG_1981 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1981" - CRISPR-associated protein Cas2 in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1981CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (96 aa)    
Predicted Functional Partners:
PG_1982
CRISPR-associated Cas1 family protein (1031 aa)
              0.872
PG_1989
Hypothetical protein (72 aa)
         
  0.625
PG_1985
CRISPR-associated Cmr4 family protein (233 aa)
              0.618
PG_1984
Hypothetical protein (147 aa)
              0.618
PG_1983
CRISPR-associated Cmr5 family protein (253 aa)
              0.618
PG_1988
Hypothetical protein (480 aa)
              0.595
PG_1987
CRISPR-associated Csm1 family protein (548 aa)
              0.595
PG_1986
CRISPR-associated Cmr3 family protein (396 aa)
              0.595
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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