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PG_1982 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1982" - CRISPR-associated Cas1 family protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1982CRISPR-associated Cas1 family protein (1031 aa)    
Predicted Functional Partners:
PG_1981
CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (96 aa)
              0.872
PG_1985
CRISPR-associated Cmr4 family protein (233 aa)
 
          0.837
PG_1983
CRISPR-associated Cmr5 family protein (253 aa)
 
          0.819
polA
DNA polymerase type I (926 aa)
   
   
  0.677
PG_1984
Hypothetical protein (147 aa)
              0.664
PG_1986
CRISPR-associated Cmr3 family protein (396 aa)
              0.647
PG_1988
Hypothetical protein (480 aa)
              0.643
PG_1987
CRISPR-associated Csm1 family protein (548 aa)
              0.639
cas3
CRISPR-associated helicase Cas3 (778 aa)
   
   
  0.610
PG_1989
Hypothetical protein (72 aa)
              0.608
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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