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PG_1985 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_1985" - CRISPR-associated Cmr4 family protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_1985CRISPR-associated Cmr4 family protein (233 aa)    
Predicted Functional Partners:
PG_1983
CRISPR-associated Cmr5 family protein (253 aa)
 
          0.969
PG_1986
CRISPR-associated Cmr3 family protein (396 aa)
         
  0.884
PG_1987
CRISPR-associated Csm1 family protein (548 aa)
         
  0.875
PG_1984
Hypothetical protein (147 aa)
              0.863
PG_1982
CRISPR-associated Cas1 family protein (1031 aa)
 
          0.837
PG_1988
Hypothetical protein (480 aa)
              0.834
PG_1989
Hypothetical protein (72 aa)
              0.782
PG_0411
Hemagglutinin (925 aa)
   
          0.732
hagE
Hemagglutinin protein HagE (1706 aa)
   
          0.705
PG_1652
Hypothetical protein (596 aa)
   
          0.696
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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