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PG_2000 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2000" - Signal peptidase-like protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2000Signal peptidase-like protein (208 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase (238 aa)
              0.884
PG_1999
Hypothetical protein (212 aa)
              0.870
lepB
Signal peptidase I (465 aa)
 
       
0.868
secDF
Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (981 aa)
   
   
  0.761
dgt
Deoxyguanosinetriphosphate triphosphohydrolase (447 aa)
              0.643
PG_1998
Polyprenyl synthetase (292 aa)
   
        0.514
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (595 aa)
   
   
  0.511
polA
DNA polymerase type I (926 aa)
   
   
  0.509
PG_0011
Glycosyl hydrolase (1003 aa)
   
   
  0.498
htrA
htrA protein (498 aa)
   
   
  0.489
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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