STRINGSTRING
lepB protein (Porphyromonas gingivalis W83) - STRING interaction network
"lepB" - Signal peptidase I in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lepBSignal peptidase I (465 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase (238 aa)
 
          0.929
PG_1999
Hypothetical protein (212 aa)
 
          0.911
PG_2000
Signal peptidase-like protein (208 aa)
 
       
0.868
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (226 aa)
 
     
  0.799
PG_0191
Outer membrane protein (891 aa)
 
 
  0.799
secDF
Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (981 aa)
   
   
  0.788
yidC
Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (627 aa)
 
 
  0.771
PG_1217
Hypothetical protein (110 aa)
 
          0.762
PG_1430
Hypothetical protein (228 aa)
   
          0.756
PG_2144
Hypothetical protein (1099 aa)
   
          0.739
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (3%) [HD]