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dapB protein (Porphyromonas gingivalis W83) - STRING interaction network
"dapB" - Dihydrodipicolinate reductase in Porphyromonas gingivalis W83
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapBDihydrodipicolinate reductase (238 aa)    
Predicted Functional Partners:
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (289 aa)
 
 
  0.994
lepB
Signal peptidase I (465 aa)
 
          0.929
PG_2000
Signal peptidase-like protein (208 aa)
              0.884
PG_1327
Aminotransferase (436 aa)
   
 
  0.880
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (382 aa)
 
   
  0.870
lysC
Aspartate kinase (446 aa)
 
   
  0.866
PG_1999
Hypothetical protein (212 aa)
              0.835
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (337 aa)
   
   
  0.757
PG_1751
Class V aminotransferase (376 aa)
       
    0.732
PG_0735
Class V aminotransferase (404 aa)
       
    0.732
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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