STRINGSTRING
dgt protein (Porphyromonas gingivalis W83) - STRING interaction network
"dgt" - Deoxyguanosinetriphosphate triphosphohydrolase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgtDeoxyguanosinetriphosphate triphosphohydrolase (447 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase (238 aa)
              0.667
PG_1999
Hypothetical protein (212 aa)
 
          0.651
lepB
Signal peptidase I (465 aa)
              0.643
PG_2000
Signal peptidase-like protein (208 aa)
              0.643
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (505 aa)
         
  0.585
PG_2043
Hypothetical protein (364 aa)
   
        0.544
PG_2004
Hypothetical protein (330 aa)
              0.539
PG_1745
Phosphoribulokinase (529 aa)
              0.535
argS
arginyl-tRNA synthetase (597 aa)
         
  0.468
glyS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly) (515 aa)
         
  0.455
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (3%) [HD]