STRINGSTRING
PG_2040 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2040" - Histone-like family DNA-binding protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2040Histone-like family DNA-binding protein (158 aa)    
Predicted Functional Partners:
PG_2079
Hypothetical protein (158 aa)
   
          0.718
PG_1301
Hypothetical protein (271 aa)
   
          0.710
PG_0633
Hypothetical protein (275 aa)
   
          0.707
PG_0566
Histone-like family DNA-binding protein (168 aa)
   
          0.700
PG0566
Histone-like family DNA-binding protein (168 aa)
   
          0.700
PG_0853
Histone-like family DNA-binding protein (161 aa)
   
          0.666
PG0853
Histone-like family DNA-binding protein (161 aa)
   
          0.666
PG_0555
Histone-like family DNA-binding protein (172 aa)
   
          0.666
PG_0706
Hypothetical protein (150 aa)
   
          0.645
PG_0781
Hypothetical protein (156 aa)
   
          0.642
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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