STRINGSTRING
PG_2043 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2043" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2043Hypothetical protein (364 aa)    
Predicted Functional Partners:
PG_2044
Hypothetical protein (251 aa)
 
          0.920
PG_1745
Phosphoribulokinase (529 aa)
   
      0.718
udk
Uridine kinase (209 aa)
   
      0.649
rpoD
RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (287 aa)
     
 
  0.645
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (673 aa)
   
        0.590
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (357 aa)
              0.576
PG_1641
Phosphotyrosine protein phosphatase (167 aa)
   
        0.547
dgt
Deoxyguanosinetriphosphate triphosphohydrolase (447 aa)
   
        0.544
pepD-2
Aminoacyl-histidine dipeptidase (486 aa)
              0.538
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides (405 aa)
              0.538
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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