STRINGSTRING
tagD protein (Porphyromonas gingivalis W83) - STRING interaction network
"tagD" - Glycerol-3-phosphate cytidylyltransferase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagDGlycerol-3-phosphate cytidylyltransferase (152 aa)    
Predicted Functional Partners:
PG_2069
Short chain dehydrogenase/reductase oxidoreductase (243 aa)
              0.861
PG_2070
Hypothetical protein (308 aa)
 
          0.859
PG_2071
Hypothetical protein (311 aa)
              0.836
PG_2072
UvrD/REP helicase (1102 aa)
              0.834
pdxA
Pyridoxal phosphate biosynthetic protein PdxA; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (365 aa)
              0.787
PG_2066
Putative lipoprotein (351 aa)
              0.652
gpsA
Glycerol-3-phosphate dehydrogenase (334 aa)
       
    0.526
pyrF
Orotidine 5’-monophosphate decarboxylase (276 aa)
     
      0.472
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (341 aa)
              0.472
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (210 aa)
     
 
  0.456
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
Server load: low (13%) [HD]