STRINGSTRING
PG_2072 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2072" - UvrD/REP helicase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2072UvrD/REP helicase (1102 aa)    
Predicted Functional Partners:
PG_1303
Helicase (471 aa)
 
  0.981
PG_2047
Helicase (761 aa)
   
  0.961
PG_0062
Hypothetical protein (680 aa)
   
  0.961
PG_2071
Hypothetical protein (311 aa)
 
          0.904
PG_2070
Hypothetical protein (308 aa)
 
          0.882
PG_2069
Short chain dehydrogenase/reductase oxidoreductase (243 aa)
 
          0.881
PG_0517
Hypothetical protein (960 aa)
 
     
  0.868
tagD
Glycerol-3-phosphate cytidylyltransferase (152 aa)
              0.834
pdxA
Pyridoxal phosphate biosynthetic protein PdxA; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (365 aa)
   
        0.778
PG_2094
Hypothetical protein (1515 aa)
   
          0.746
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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