STRINGSTRING
PG_2086 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2086" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2086Hypothetical protein (139 aa)    
Predicted Functional Partners:
rlmH
rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (157 aa)
              0.860
PG_2157
Glutamine cyclotransferase-like protein (333 aa)
   
          0.759
PG_0516
Hypothetical protein (415 aa)
   
          0.710
trpS
tryptophanyl-tRNA synthetase (327 aa)
              0.682
PG_0026
Hypothetical protein (1123 aa)
   
          0.669
msrA
Peptide methionine sulfoxide reductase (352 aa)
              0.662
PG_1097
Putative bifunctional UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase/alanine racemase (823 aa)
   
          0.661
PG_0133
Hypothetical protein (501 aa)
   
          0.660
PG_0241
Putative lipoprotein (284 aa)
   
          0.649
PG_2127
Hypothetical protein (147 aa)
   
          0.644
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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