STRINGSTRING
msrA protein (Porphyromonas gingivalis W83) - STRING interaction network
"msrA" - Peptide methionine sulfoxide reductase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide methionine sulfoxide reductase (352 aa)    
Predicted Functional Partners:
trx
Thioredoxin (104 aa)
   
  0.967
PG_1704
Thiol-disulfide interchange protein dsbD (682 aa)
     
 
  0.966
PG_2175
Hypothetical protein (160 aa)
   
  0.966
PG_2042
Thioredoxin family protein (336 aa)
   
  0.966
PG_1638
Thioredoxin family protein (328 aa)
   
  0.966
PG_1084
Thioredoxin family protein (358 aa)
   
  0.966
PG_0275
Thioredoxin family protein (169 aa)
   
  0.966
PG_0115
Hexapeptide transferase (145 aa)
       
  0.829
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (429 aa)
   
 
  0.792
gapA
Glyceraldehyde 3-phosphate dehydrogenase, type I (336 aa)
   
 
  0.766
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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