STRINGSTRING
PG_2139 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2139" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2139Hypothetical protein (159 aa)    
Predicted Functional Partners:
rpmF
Ribosomal protein L32 (61 aa)
              0.887
PG_2095
Putative lipoprotein (775 aa)
   
          0.743
PG_1899
TonB-dependent receptor (794 aa)
   
          0.723
PG_2096
Hypothetical protein (1596 aa)
   
          0.714
PG_0280
ABC transporter permease (442 aa)
   
          0.694
fabH
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids (335 aa)
              0.692
PG_0362
Hypothetical protein (722 aa)
   
          0.687
PG_0622
Hypothetical protein (430 aa)
   
          0.677
PG_0932
DNA polymerase III, delta prime subunit (416 aa)
   
          0.673
rnpA
Ribonuclease P; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (137 aa)
   
          0.647
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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