STRINGSTRING
PG_2145 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2145" - Polysaccharide deacetylase in Porphyromonas gingivalis W83
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2145Polysaccharide deacetylase (201 aa)    
Predicted Functional Partners:
PG_2146
Hypothetical protein (251 aa)
              0.860
PG_2144
Hypothetical protein (1099 aa)
              0.812
pdhD
Alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase (449 aa)
       
    0.794
aroB
3-dehydroquinate synthase (353 aa)
       
    0.741
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (437 aa)
         
  0.612
PG_0294
Glycosyl transferase group 2 family protein (296 aa)
 
   
  0.583
polA
DNA polymerase type I (926 aa)
         
  0.552
PG_1393
Penicillin-binding protein 2 (621 aa)
   
 
    0.540
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (281 aa)
       
    0.531
PG_0118
Glycosyl transferase group 2 family protein (351 aa)
 
   
  0.528
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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