STRINGSTRING
PG_2146 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2146" - Hypothetical protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2146Hypothetical protein (251 aa)    
Predicted Functional Partners:
PG_2145
Polysaccharide deacetylase (201 aa)
              0.860
PG_2144
Hypothetical protein (1099 aa)
              0.713
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (437 aa)
              0.582
PG_1096
Hypothetical protein (360 aa)
   
          0.493
PG_1180
Hypothetical protein (801 aa)
     
        0.475
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (299 aa)
              0.455
PG_1651
Hypothetical protein (995 aa)
   
          0.446
PG_0363
Hypothetical protein (275 aa)
   
          0.446
ilvE
Branched-chain amino acid aminotransferase (339 aa)
              0.400
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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