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PG_2150 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2150" - LysM domain-containing protein in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2150LysM domain-containing protein (501 aa)    
Predicted Functional Partners:
PG_2149
Hypothetical protein (240 aa)
 
          0.907
PG_1388
Hypothetical protein (264 aa)
   
          0.742
PG_0759
Hypothetical protein (717 aa)
   
          0.699
PG_1652
Hypothetical protein (596 aa)
   
          0.629
PG_0411
Hemagglutinin (925 aa)
   
          0.618
PG_0574
Hypothetical protein (157 aa)
   
          0.593
PG_0633
Hypothetical protein (275 aa)
   
          0.592
PG_1301
Hypothetical protein (271 aa)
   
          0.589
PG_2094
Hypothetical protein (1515 aa)
   
          0.585
PG_0273
4’-phosphopantetheinyl transferase (198 aa)
   
          0.575
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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