STRINGSTRING
PG_2159 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2159" - Protoporphyrinogen oxidase in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2159Protoporphyrinogen oxidase (465 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (345 aa)
   
 
  0.990
PG_1553
CobN/magnesium chelatase (1469 aa)
   
 
    0.980
PG_2158
Hypothetical protein (141 aa)
   
        0.863
PG_0475
Oxygen-independent coproporphyrinogen III oxidase (376 aa)
   
 
  0.842
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (196 aa)
   
        0.814
PG_2157
Glutamine cyclotransferase-like protein (333 aa)
 
          0.811
batA
batA protein (327 aa)
       
    0.783
batB
batB protein (339 aa)
       
    0.781
rfbB
dTDP-glucose 4,6-dehydratase (354 aa)
   
        0.461
PG_1155
ADP-heptose--LPS heptosyltransferase (296 aa)
   
 
    0.449
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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