STRINGSTRING
PG_2170 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2170" - Sugar transporter in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2170Sugar transporter (429 aa)    
Predicted Functional Partners:
PG_2171
D-isomer specific 2-hydroxyacid dehydrogenase (319 aa)
              0.724
PG_0897
Alpha-amylase (534 aa)
   
          0.574
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (258 aa)
           
  0.529
PG_1734
Transporter (313 aa)
   
          0.439
PG_1685
Hypothetical protein (260 aa)
   
          0.438
omp28
Outer membrane lipoprotein Omp28 (290 aa)
              0.420
PG_2172
Hypothetical protein (248 aa)
              0.420
PG_0724
Prolyl oligopeptidase (648 aa)
   
          0.413
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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