STRINGSTRING
PG_2185 protein (Porphyromonas gingivalis W83) - STRING interaction network
"PG_2185" - Transporter in Porphyromonas gingivalis W83
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PG_2185Transporter (438 aa)    
Predicted Functional Partners:
PG_2186
Transcriptional regulator (111 aa)
 
          0.959
PG_1715
Hypothetical protein (887 aa)
   
          0.660
PG_0441
Hypothetical protein (877 aa)
   
          0.579
PG_0682
ABC transporter permease (783 aa)
   
          0.569
PG_0937
Hypothetical protein (240 aa)
   
          0.550
PG_0226
Transglutaminase (897 aa)
   
          0.530
PG_0439
Hypothetical protein (299 aa)
   
          0.528
PG_0448
Hypothetical protein (434 aa)
   
          0.509
PG_0535
Hypothetical protein (206 aa)
   
          0.503
lysC
Aspartate kinase (446 aa)
 
          0.497
Your Current Organism:
Porphyromonas gingivalis W83
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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